Motif HL_67367.1 Version HL_67367.1 of this group appears in releases 1.0 to 1.4
| #S | Loop id | PDB | Disc | #Non-core | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 1-9 | 2-8 | 3-7 | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_2XZM_032 | 2XZM | 0.0000 | 3 | A | 18S RRNA | U | 1522 | U | 1523 | U | 1524 | G | 1525 | G | 1526 | A | 1527 | A | 1528 | U | 1532 | G | 1533 | ncWW | ntWH | |
| 2 | HL_3RG5_002 | 3RG5 | 0.6440 | 0 | A | Selenocysteine transfer RNA | G | 31 | C | 32 | U | 33 | U | 34 | C | 35 | A | 36 | A | 37 | A | 38 | C | 39 | cWW | ncWW | tWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| UUUGGAAUUGUG | 1 |
| GCUUCAAAC | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UUGGAAUUGU | 1 |
| CUUCAAA | 1 |
Release history
| Release | 1.0 | 1.1 | 1.2 | 1.3 | 1.4 |
|---|---|---|---|---|---|
| Date | 2013-03-04 | 2013-04-06 | 2013-05-04 | 2013-06-01 | 2013-07-03 |
| Status | New id, 2 parents | Exact match | Exact match | Exact match | Exact match |
Parent motifs
| Parent motif | Common motif instances | Only in HL_67367.1 | Only in the parent motif |
|---|---|---|---|
| HL_70459.1 Compare | HL_3RG5_002 | HL_2XZM_032 | HL_3P49_004 |
| HL_20739.1 Compare | HL_2XZM_032 | HL_3RG5_002 | HL_1P6V_002, HL_3U5F_034 |
Children motifs
| Child motif | Common motif instances | Only in HL_67367.1 | Only in the child motif |
|---|---|---|---|
| HL_19528.1 Compare | HL_3RG5_002 | HL_2XZM_032 | HL_3P49_004 |
- Annotations
-
- (2)
- Basepair signature
- cWW-R-R-R-R-R-R
- Heat map statistics
- Min 0.64 | Avg 0.32 | Max 0.64
Coloring options: