HL_2ZJR_028

3D structure

PDB id

2ZJR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Refined native structure of the large ribosomal subunit (50S) from Deinococcus radiodurans

Experimental method

X-RAY DIFFRACTION

Resolution

2.91 Å

Loop

Sequence

CUUAGAAGCAG

Length

11 nucleotides

Bulged bases

2ZJR|1|X|A|1081

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_72543.1

Basepair signature

cWW-tSH-R-R-R-R-R-R

Number of instances in this motif group

5

Unit IDs

2ZJR|1|X|C|1075
2ZJR|1|X|U|1076
2ZJR|1|X|U|1077
2ZJR|1|X|A|1078
2ZJR|1|X|G|1079
2ZJR|1|X|A|1080
2ZJR|1|X|A|1081
2ZJR|1|X|G|1082
2ZJR|1|X|C|1083
2ZJR|1|X|A|1084
2ZJR|1|X|G|1085

Current chains

Chain X

ribosomal 23S RNA

Nearby chains

Chain F

50S ribosomal protein L11

Chain J

50S ribosomal protein L16