HL_2ZJR_035

3D structure

PDB id

2ZJR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Refined native structure of the large ribosomal subunit (50S) from Deinococcus radiodurans

Experimental method

X-RAY DIFFRACTION

Resolution

2.91 Å

Loop

Sequence

GUCAAGAUUC

Length

10 nucleotides

Bulged bases

2ZJR|1|X|U|1409

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_76105.1

Basepair signature

cWW-R-tWH-R-R-R-R

Number of instances in this motif group

2

Unit IDs

2ZJR|1|X|G|1402
2ZJR|1|X|U|1403
2ZJR|1|X|C|1404
2ZJR|1|X|A|1405
2ZJR|1|X|A|1406
2ZJR|1|X|G|1407
2ZJR|1|X|A|1408
2ZJR|1|X|U|1409
2ZJR|1|X|U|1410
2ZJR|1|X|C|1411

Current chains

Chain X

ribosomal 23S RNA

Nearby chains

Chain Q

50S ribosomal protein L23