HL_2ZJR_036

3D structure

PDB id

2ZJR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Refined native structure of the large ribosomal subunit (50S) from Deinococcus radiodurans

Experimental method

X-RAY DIFFRACTION

Resolution

2.91 Å

Loop

Sequence

CUAUGGCUAUG

Length

11 nucleotides

Bulged bases

2ZJR|1|X|U|1475

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_15771.1

Basepair signature

cWW-R-R-R-R-R-R-R

Number of instances in this motif group

1

Unit IDs

2ZJR|1|X|C|1466
2ZJR|1|X|U|1467
2ZJR|1|X|A|1468
2ZJR|1|X|U|1469
2ZJR|1|X|G|1470
2ZJR|1|X|G|1471
2ZJR|1|X|C|1472
2ZJR|1|X|U|1473
2ZJR|1|X|A|1474
2ZJR|1|X|U|1475
2ZJR|1|X|G|1476

Current chains

Chain X

ribosomal 23S RNA

Nearby chains

Chain K

50S ribosomal protein L17