Motif HL_15771.1 Version HL_15771.1 of this group appears in releases 0.3 to 1.0
| #S | Loop id | PDB | Disc | #Non-core | Annotation | Chain(s) | Standardized name | 1 | 2 | 3 | 4 | 5 | 6 | 7 | 8 | 9 | 10 | 1-10 | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | HL_2ZJR_036 | 2ZJR | 0 | 1 | Pseudoknot (H) | X | LSU rRNA | C | 1466 | U | 1467 | A | 1468 | U | 1469 | G | 1470 | G | 1471 | C | 1472 | U | 1473 | A | 1474 | G | 1476 | cWW |
3D structures
Complete motif including flanking bases
| Sequence | Counts |
|---|---|
| CUAUGGCUAUG | 1 |
Non-Watson-Crick part of the motif
| Sequence | Counts |
|---|---|
| UAUGGCUAU | 1 |
Release history
| Release | 0.3 | 0.4 | 0.5 | 0.6 | 0.7 | 0.8 | 1.0 |
|---|---|---|---|---|---|---|---|
| Date | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-02-17 | 2013-03-04 |
| Status | New id, 1 parent | Exact match | Exact match | Exact match | Exact match | Exact match | Exact match |
Parent motifs
| Parent motif | Common motif instances | Only in HL_15771.1 | Only in the parent motif |
|---|---|---|---|
| HL_13798.1 Compare | HL_2ZJR_036 | HL_3PYO_036 |
Children motifs
This motif has no children motifs.- Annotations
-
- Pseudoknot (H) (1)
- Basepair signature
- cWW-R-R-R-R-R-R-R
- Heat map statistics
- Min 0.00 | Avg 0.00 | Max 0.00
Coloring options: