HL_2ZJR_057

3D structure

PDB id

2ZJR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Refined native structure of the large ribosomal subunit (50S) from Deinococcus radiodurans

Experimental method

X-RAY DIFFRACTION

Resolution

2.91 Å

Loop

Sequence

CGUGUGGAAG

Length

10 nucleotides

Bulged bases

2ZJR|1|X|U|2385

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_90579.1

Basepair signature

cWW-tSH-R-R-R-R-R-R

Number of instances in this motif group

3

Unit IDs

2ZJR|1|X|C|2383
2ZJR|1|X|G|2384
2ZJR|1|X|U|2385
2ZJR|1|X|G|2386
2ZJR|1|X|U|2387
2ZJR|1|X|G|2388
2ZJR|1|X|G|2389
2ZJR|1|X|A|2390
2ZJR|1|X|A|2391
2ZJR|1|X|G|2392

Current chains

Chain X

ribosomal 23S RNA

Nearby chains

Chain I

50S ribosomal protein L15

Chain U

50S ribosomal protein L28