HL_30QZ_048

3D structure

PDB id

30QZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 50S ribosome with peptidyl-tRNA and Hsp15

Experimental method

ELECTRON MICROSCOPY

Resolution

2.23 Å

Loop

Sequence

GUG(6MZ)AGAUGC

Length

10 nucleotides

Bulged bases

30QZ|1|a|6MZ|2030, 30QZ|1|a|A|2031, 30QZ|1|a|G|2032

QA status

Modified nucleotides: 6MZ

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

30QZ|1|a|G|2027
30QZ|1|a|U|2028
30QZ|1|a|G|2029
30QZ|1|a|6MZ|2030
30QZ|1|a|A|2031
30QZ|1|a|G|2032
30QZ|1|a|A|2033
30QZ|1|a|U|2034
30QZ|1|a|G|2035
30QZ|1|a|C|2036

Current chains

Chain a

23S rRNA

Nearby chains

Chain d

Large ribosomal subunit protein uL3

Chain q

Large ribosomal subunit protein bL21

Chain z

Large ribosomal subunit protein bL32