HL_30RB_074

3D structure

PDB id

30RB (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with peptidyl-tRNA and Hsp15

Experimental method

ELECTRON MICROSCOPY

Resolution

2.92 Å

Loop

Sequence

UUUAUUAAAAA

Length

11 nucleotides

Bulged bases

30RB|1|a|A|1780, 30RB|1|a|U|1781, 30RB|1|a|U|1782, 30RB|1|a|A|1786

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_30RB_074 not in the Motif Atlas

Geometric match to HL_9E6Q_045

Geometric discrepancy: 0.0491

The information below is about HL_9E6Q_045

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_87681.3

Basepair signature

cWW-tWH-tWH-F

Number of instances in this motif group

10

Unit IDs

30RB|1|a|U|1777
30RB|1|a|U|1778
30RB|1|a|U|1779
30RB|1|a|A|1780
30RB|1|a|U|1781
30RB|1|a|U|1782
30RB|1|a|A|1783
30RB|1|a|A|1784
30RB|1|a|A|1785
30RB|1|a|A|1786
30RB|1|a|A|1787

Current chains

Chain a

23S rRNA

Nearby chains

Chain 1

Large ribosomal subunit protein bL34

Chain c

Large ribosomal subunit protein uL2