HL_36HT_005

3D structure

PDB id

36HT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Retron-Kva2 Complex Composite

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GUAUC

Length

5 nucleotides

Bulged bases

36HT|1|K|U|52, 36HT|1|K|U|54

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_36HT_005 not in the Motif Atlas

Geometric match to HL_2Y8W_001

Geometric discrepancy: 0.3332

The information below is about HL_2Y8W_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_40612.1

Basepair signature

cWW

Number of instances in this motif group

3

Unit IDs

36HT|1|K|G|51
36HT|1|K|U|52
36HT|1|K|A|53
36HT|1|K|U|54
36HT|1|K|C|55

Current chains

Chain K

Retron-Kva2 msrRNA

Nearby chains

Chain J

Retron-Kva2 Reverse Transcriptase