HL_3ADD_004
3D structure
- PDB id
- 3ADD (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of O-phosphoseryl-tRNA kinase complexed with selenocysteine tRNA and AMPPNP (crystal type 3)
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.4 Å
Loop
- Sequence
- GUUCAAUUC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_43993.1
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 141
Unit IDs
3ADD|1|C|G|53
3ADD|1|C|U|54
3ADD|1|C|U|55
3ADD|1|C|C|56
3ADD|1|C|A|57
3ADD|1|C|A|58
3ADD|1|C|U|59
3ADD|1|C|U|60
3ADD|1|C|C|61
Current chains
- Chain C
- selenocysteine tRNA
Nearby chains
- Chain A
- L-seryl-tRNA(Sec) kinase
Coloring options: