HL_3BBX_063

3D structure

PDB id

3BBX (explore in PDB, NAKB, or RNA 3D Hub)

Description

The Hsp15 protein fitted into the low resolution Cryo-EM map of the 50S.nc-tRNA.Hsp15 complex

Experimental method

ELECTRON MICROSCOPY

Resolution

10 Å

Loop

Sequence

CUGUUCG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3BBX_063 not in the Motif Atlas

Homologous match to HL_4WF9_058

Geometric discrepancy: 0.1912

The information below is about HL_4WF9_058

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_30068.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

15

Unit IDs

3BBX|1|B|C|2551
3BBX|1|B|U|2552
3BBX|1|B|G|2553
3BBX|1|B|U|2554
3BBX|1|B|U|2555
3BBX|1|B|C|2556
3BBX|1|B|G|2557

Current chains

Chain B

23S ribosomal RNA

Nearby chains