3D structure

PDB id
3BBX (explore in PDB, NAKB, or RNA 3D Hub)
Description
The Hsp15 protein fitted into the low resolution Cryo-EM map of the 50S.nc-tRNA.Hsp15 complex
Experimental method
ELECTRON MICROSCOPY
Resolution
10 Å

Loop

Sequence
CUGUUCG
Length
7 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_3BBX_063 not in the Motif Atlas
Homologous match to HL_4WF9_058
Geometric discrepancy: 0.1912
The information below is about HL_4WF9_058
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_30068.2
Basepair signature
cWW-F-F-F-F
Number of instances in this motif group
15

Unit IDs

3BBX|1|B|C|2551
3BBX|1|B|U|2552
3BBX|1|B|G|2553
3BBX|1|B|U|2554
3BBX|1|B|U|2555
3BBX|1|B|C|2556
3BBX|1|B|G|2557

Current chains

Chain B
23S ribosomal RNA

Nearby chains

No other chains within 10Å

Coloring options:


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