HL_3CC2_038
3D structure
- PDB id
- 3CC2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The Refined Crystal Structure of the Haloarcula Marismortui Large Ribosomal Subunit at 2.4 Angstrom Resolution with rrnA Sequence for the 23S rRNA and Genome-derived Sequences for r-Proteins
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.4 Å
Loop
- Sequence
- GCAUCGC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Missing nucleotides
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3CC2_038 not in the Motif Atlas
- Homologous match to HL_4V9F_038
- Geometric discrepancy: 0.1146
- The information below is about HL_4V9F_038
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_84085.3
- Basepair signature
- cWW-tSH-F-F-F-F
- Number of instances in this motif group
- 17
Unit IDs
3CC2|1|0|G|1557
3CC2|1|0|C|1558
3CC2|1|0|A|1559
3CC2|1|0|U|1561
3CC2|1|0|C|1562
3CC2|1|0|G|1563
3CC2|1|0|C|1564
Current chains
- Chain 0
- 23S RIBOSOMAL RNA
Nearby chains
- Chain P
- 50S ribosomal protein L19e
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