3D structure

PDB id
3CC4 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Co-crystal Structure of Anisomycin Bound to the 50S Ribosomal Subunit
Experimental method
X-RAY DIFFRACTION
Resolution
2.7 Å

Loop

Sequence
CUUAGAAGCAG
Length
11 nucleotides
Bulged bases
3CC4|1|0|A|1174
QA status
Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_3CC4_030 not in the Motif Atlas
Homologous match to HL_4V9F_030
Geometric discrepancy: 0.2027
The information below is about HL_4V9F_030
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_92304.1
Basepair signature
cWW-cSW-R-R-tSH-R-R
Number of instances in this motif group
5

Unit IDs

3CC4|1|0|C|1168
3CC4|1|0|U|1169
3CC4|1|0|U|1170
3CC4|1|0|A|1171
3CC4|1|0|G|1172
3CC4|1|0|A|1173
3CC4|1|0|A|1174
3CC4|1|0|G|1175
3CC4|1|0|C|1176
3CC4|1|0|A|1177
3CC4|1|0|G|1178

Current chains

Chain 0
23S ribosomal RNA

Nearby chains

Chain I
50S ribosomal protein L11P

Coloring options:


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