HL_3CC4_037

3D structure

PDB id

3CC4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Co-crystal Structure of Anisomycin Bound to the 50S Ribosomal Subunit

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

GUUAAUAUUC

Length

10 nucleotides

Bulged bases

3CC4|1|0|U|1505, 3CC4|1|0|U|1506

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3CC4_037 not in the Motif Atlas

Homologous match to HL_4V9F_037

Geometric discrepancy: 0.0342

The information below is about HL_4V9F_037

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81545.2

Basepair signature

cWW-tWH-F-F-F-F

Number of instances in this motif group

7

Unit IDs

3CC4|1|0|G|1498
3CC4|1|0|U|1499
3CC4|1|0|U|1500
3CC4|1|0|A|1501
3CC4|1|0|A|1502
3CC4|1|0|U|1503
3CC4|1|0|A|1504
3CC4|1|0|U|1505
3CC4|1|0|U|1506
3CC4|1|0|C|1507

Current chains

Chain 0

23S ribosomal RNA

Nearby chains

Chain 2

50S ribosomal protein L39e

Chain P

50S ribosomal protein L19e

Chain S

50S ribosomal protein L23P