HL_3CCE_030

3D structure

PDB id

3CCE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation U2535A

Experimental method

X-RAY DIFFRACTION

Resolution

2.75 Å

Loop

Sequence

CUUAGAAGCAG

Length

11 nucleotides

Bulged bases

3CCE|1|0|A|1174

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3CCE_030 not in the Motif Atlas

Homologous match to HL_4V9F_030

Geometric discrepancy: 0.2224

The information below is about HL_4V9F_030

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_92304.1

Basepair signature

cWW-cSW-R-R-tSH-R-R

Number of instances in this motif group

5

Unit IDs

3CCE|1|0|C|1168
3CCE|1|0|U|1169
3CCE|1|0|U|1170
3CCE|1|0|A|1171
3CCE|1|0|G|1172
3CCE|1|0|A|1173
3CCE|1|0|A|1174
3CCE|1|0|G|1175
3CCE|1|0|C|1176
3CCE|1|0|A|1177
3CCE|1|0|G|1178

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain I

50S ribosomal protein L11P