HL_3CCE_050

3D structure

PDB id

3CCE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation U2535A

Experimental method

X-RAY DIFFRACTION

Resolution

2.75 Å

Loop

Sequence

GGGGGUC

Length

7 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3CCE_050 not in the Motif Atlas

Geometric match to HL_3FOZ_004

Geometric discrepancy: 0.3643

The information below is about HL_3FOZ_004

Detailed Annotation

tRNA D-loop

Broad Annotation

No text annotation

Motif group

HL_45175.1

Basepair signature

cWW-cWS-F-F

Number of instances in this motif group

5

Unit IDs

3CCE|1|0|G|1947
3CCE|1|0|G|1948
3CCE|1|0|G|1949
3CCE|1|0|G|1950
3CCE|1|0|G|1951
3CCE|1|0|U|1964
3CCE|1|0|C|1965

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains