HL_3CCE_059

3D structure

PDB id

3CCE (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation U2535A

Experimental method

X-RAY DIFFRACTION

Resolution

2.75 Å

Loop

Sequence

UUCCCAACGAG

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3CCE_059 not in the Motif Atlas

Homologous match to HL_4V9F_059

Geometric discrepancy: 0.0318

The information below is about HL_4V9F_059

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91939.2

Basepair signature

cWW-tSH-tHH-tWW-F-F-F

Number of instances in this motif group

8

Unit IDs

3CCE|1|0|U|2389
3CCE|1|0|U|2390
3CCE|1|0|C|2391
3CCE|1|0|C|2392
3CCE|1|0|C|2393
3CCE|1|0|A|2394
3CCE|1|0|A|2395
3CCE|1|0|C|2396
3CCE|1|0|G|2397
3CCE|1|0|A|2398
3CCE|1|0|G|2399

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain 3

50S ribosomal protein L44E

Chain L

50S ribosomal protein L15P

Chain Q

50S ribosomal protein L21e