HL_3CCJ_019

3D structure

PDB id

3CCJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation C2534U

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GAGUAUC

Length

7 nucleotides

Bulged bases

3CCJ|1|0|G|672, 3CCJ|1|0|A|674

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3CCJ_019 not in the Motif Atlas

Homologous match to HL_4V9F_019

Geometric discrepancy: 0.1316

The information below is about HL_4V9F_019

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_42293.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

5

Unit IDs

3CCJ|1|0|G|670
3CCJ|1|0|A|671
3CCJ|1|0|G|672
3CCJ|1|0|U|673
3CCJ|1|0|A|674
3CCJ|1|0|U|675
3CCJ|1|0|C|676

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain C

50S ribosomal protein L4P