HL_3CCJ_037

3D structure

PDB id

3CCJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation C2534U

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GUUAAUAUUC

Length

10 nucleotides

Bulged bases

3CCJ|1|0|U|1505

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3CCJ_037 not in the Motif Atlas

Homologous match to HL_4V9F_037

Geometric discrepancy: 0.0983

The information below is about HL_4V9F_037

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_77449.1

Basepair signature

cWW-tWH-F-F-F-F

Number of instances in this motif group

14

Unit IDs

3CCJ|1|0|G|1498
3CCJ|1|0|U|1499
3CCJ|1|0|U|1500
3CCJ|1|0|A|1501
3CCJ|1|0|A|1502
3CCJ|1|0|U|1503
3CCJ|1|0|A|1504
3CCJ|1|0|U|1505
3CCJ|1|0|U|1506
3CCJ|1|0|C|1507

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain P

50S ribosomal protein L19e

Chain S

50S ribosomal protein L23P