HL_3CCL_019

3D structure

PDB id

3CCL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation U2535C. Density for Anisomycin is visible but not included in model.

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GAGUAUC

Length

7 nucleotides

Bulged bases

3CCL|1|0|G|672, 3CCL|1|0|A|674

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3CCL_019 not in the Motif Atlas

Homologous match to HL_4V9F_019

Geometric discrepancy: 0.0518

The information below is about HL_4V9F_019

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_42293.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

5

Unit IDs

3CCL|1|0|G|670
3CCL|1|0|A|671
3CCL|1|0|G|672
3CCL|1|0|U|673
3CCL|1|0|A|674
3CCL|1|0|U|675
3CCL|1|0|C|676

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain C

50S ribosomal protein L4P