HL_3CCM_049

3D structure

PDB id

3CCM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation G2611U

Experimental method

X-RAY DIFFRACTION

Resolution

2.55 Å

Loop

Sequence

CGUACAAG

Length

8 nucleotides

Bulged bases

3CCM|1|0|A|1919

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3CCM_049 not in the Motif Atlas

Homologous match to HL_4V9F_049

Geometric discrepancy: 0.0597

The information below is about HL_4V9F_049

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_91620.1

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

6

Unit IDs

3CCM|1|0|C|1916
3CCM|1|0|G|1917
3CCM|1|0|U|1918
3CCM|1|0|A|1919
3CCM|1|0|C|1920
3CCM|1|0|A|1921
3CCM|1|0|A|1922
3CCM|1|0|G|1923

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain 3

50S ribosomal protein L44E