HL_3CCM_068

3D structure

PDB id

3CCM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation G2611U

Experimental method

X-RAY DIFFRACTION

Resolution

2.55 Å

Loop

Sequence

CUGAACGCAUCUAAG

Length

15 nucleotides

Bulged bases

3CCM|1|0|G|2786

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3CCM_068 not in the Motif Atlas

Homologous match to HL_4V9F_068

Geometric discrepancy: 0.0358

The information below is about HL_4V9F_068

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_53269.1

Basepair signature

cWW-tWH-tSH-cWH-tSH-tHW-tHW-tSW

Number of instances in this motif group

11

Unit IDs

3CCM|1|0|C|2780
3CCM|1|0|U|2781
3CCM|1|0|G|2782
3CCM|1|0|A|2783
3CCM|1|0|A|2784
3CCM|1|0|C|2785
3CCM|1|0|G|2786
3CCM|1|0|C|2787
3CCM|1|0|A|2788
3CCM|1|0|U|2789
3CCM|1|0|C|2790
3CCM|1|0|U|2791
3CCM|1|0|A|2792
3CCM|1|0|A|2793
3CCM|1|0|G|2794

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain E

50S ribosomal protein L6P

Chain J

50S ribosomal protein L13P