HL_3CCQ_026

3D structure

PDB id

3CCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation A2488U

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

UCGAAG

Length

6 nucleotides

Bulged bases

3CCQ|1|0|C|920, 3CCQ|1|0|A|923

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3CCQ_026 not in the Motif Atlas

Homologous match to HL_4V9F_026

Geometric discrepancy: 0.0414

The information below is about HL_4V9F_026

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_55195.3

Basepair signature

cWW-F

Number of instances in this motif group

6

Unit IDs

3CCQ|1|0|U|919
3CCQ|1|0|C|920
3CCQ|1|0|G|921
3CCQ|1|0|A|922
3CCQ|1|0|A|923
3CCQ|1|0|G|924

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain 3

50S ribosomal protein L44E

Chain L

50S ribosomal protein L15P