HL_3CCQ_034
3D structure
- PDB id
- 3CCQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation A2488U
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- GUGAGAACC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3CCQ_034 not in the Motif Atlas
- Homologous match to HL_4V9F_034
- Geometric discrepancy: 0.051
- The information below is about HL_4V9F_034
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_28252.8
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 140
Unit IDs
3CCQ|1|0|G|1387
3CCQ|1|0|U|1388
3CCQ|1|0|G|1389
3CCQ|1|0|A|1390
3CCQ|1|0|G|1391
3CCQ|1|0|A|1392
3CCQ|1|0|A|1393
3CCQ|1|0|C|1394
3CCQ|1|0|C|1395
Current chains
- Chain 0
- 23S RIBOSOMAL RNA
Nearby chains
- Chain P
- 50S ribosomal protein L19e
- Chain R
- 50S ribosomal protein L22P
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