HL_3CCQ_049

3D structure

PDB id

3CCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation A2488U

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

CGUACAAG

Length

8 nucleotides

Bulged bases

3CCQ|1|0|A|1919

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3CCQ_049 not in the Motif Atlas

Homologous match to HL_4V9F_049

Geometric discrepancy: 0.0562

The information below is about HL_4V9F_049

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_77436.5

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

23

Unit IDs

3CCQ|1|0|C|1916
3CCQ|1|0|G|1917
3CCQ|1|0|U|1918
3CCQ|1|0|A|1919
3CCQ|1|0|C|1920
3CCQ|1|0|A|1921
3CCQ|1|0|A|1922
3CCQ|1|0|G|1923

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain 3

50S ribosomal protein L44E