HL_3CCQ_068
3D structure
- PDB id
- 3CCQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation A2488U
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- CUGAACGCAUCUAAG
- Length
- 15 nucleotides
- Bulged bases
- 3CCQ|1|0|G|2786
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3CCQ_068 not in the Motif Atlas
- Homologous match to HL_4V9F_068
- Geometric discrepancy: 0.0428
- The information below is about HL_4V9F_068
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_74055.2
- Basepair signature
- cWW-tWH-cWH-tSH-tHW-tHW-tSW
- Number of instances in this motif group
- 7
Unit IDs
3CCQ|1|0|C|2780
3CCQ|1|0|U|2781
3CCQ|1|0|G|2782
3CCQ|1|0|A|2783
3CCQ|1|0|A|2784
3CCQ|1|0|C|2785
3CCQ|1|0|G|2786
3CCQ|1|0|C|2787
3CCQ|1|0|A|2788
3CCQ|1|0|U|2789
3CCQ|1|0|C|2790
3CCQ|1|0|U|2791
3CCQ|1|0|A|2792
3CCQ|1|0|A|2793
3CCQ|1|0|G|2794
Current chains
- Chain 0
- 23S RIBOSOMAL RNA
Nearby chains
- Chain E
- 50S ribosomal protein L6P
- Chain J
- 50S ribosomal protein L13P
Coloring options: