HL_3CCR_024

3D structure

PDB id

3CCR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation A2488C. Density for anisomycin is visible but not included in the model.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

UCCUACAAUA

Length

10 nucleotides

Bulged bases

3CCR|1|0|U|840, 3CCR|1|0|A|844, 3CCR|1|0|U|845

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3CCR_024 not in the Motif Atlas

Homologous match to HL_4V9F_024

Geometric discrepancy: 0.0669

The information below is about HL_4V9F_024

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50204.1

Basepair signature

cWW-cWS-tSW-F-F

Number of instances in this motif group

11

Unit IDs

3CCR|1|0|U|837
3CCR|1|0|C|838
3CCR|1|0|C|839
3CCR|1|0|U|840
3CCR|1|0|A|841
3CCR|1|0|C|842
3CCR|1|0|A|843
3CCR|1|0|A|844
3CCR|1|0|U|845
3CCR|1|0|A|846

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain 1

50S ribosomal protein L37e

Chain B

50S ribosomal protein L3P

Chain R

50S ribosomal protein L22P