HL_3CCR_068

3D structure

PDB id

3CCR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation A2488C. Density for anisomycin is visible but not included in the model.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CUGAACGCAUCUAAG

Length

15 nucleotides

Bulged bases

3CCR|1|0|G|2786

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3CCR_068 not in the Motif Atlas

Homologous match to HL_4V9F_068

Geometric discrepancy: 0.073

The information below is about HL_4V9F_068

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_53269.2

Basepair signature

cWW-tWH-cWH-tSH-tHW-tHW-tSW

Number of instances in this motif group

10

Unit IDs

3CCR|1|0|C|2780
3CCR|1|0|U|2781
3CCR|1|0|G|2782
3CCR|1|0|A|2783
3CCR|1|0|A|2784
3CCR|1|0|C|2785
3CCR|1|0|G|2786
3CCR|1|0|C|2787
3CCR|1|0|A|2788
3CCR|1|0|U|2789
3CCR|1|0|C|2790
3CCR|1|0|U|2791
3CCR|1|0|A|2792
3CCR|1|0|A|2793
3CCR|1|0|G|2794

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain E

50S ribosomal protein L6P

Chain J

50S ribosomal protein L13P