HL_3CCR_073

3D structure

PDB id

3CCR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation A2488C. Density for anisomycin is visible but not included in the model.

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

U(OMU)(OMG)UUCG

Length

7 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: OMU, OMG

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3CCR_073 not in the Motif Atlas

Homologous match to HL_4V9F_073

Geometric discrepancy: 0.0899

The information below is about HL_4V9F_073

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_48677.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

22

Unit IDs

3CCR|1|0|U|2586
3CCR|1|0|OMU|2587
3CCR|1|0|OMG|2588
3CCR|1|0|U|2589
3CCR|1|0|U|2590
3CCR|1|0|C|2591
3CCR|1|0|G|2592

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain B

50S ribosomal protein L3P