HL_3CCS_068

3D structure

PDB id

3CCS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation G2482A

Experimental method

X-RAY DIFFRACTION

Resolution

2.95 Å

Loop

Sequence

CUGAACGCAUCUAAG

Length

15 nucleotides

Bulged bases

3CCS|1|0|G|2786

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3CCS_068 not in the Motif Atlas

Homologous match to HL_4V9F_068

Geometric discrepancy: 0.0564

The information below is about HL_4V9F_068

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_53269.1

Basepair signature

cWW-tWH-tSH-cWH-tSH-tHW-tHW-tSW

Number of instances in this motif group

11

Unit IDs

3CCS|1|0|C|2780
3CCS|1|0|U|2781
3CCS|1|0|G|2782
3CCS|1|0|A|2783
3CCS|1|0|A|2784
3CCS|1|0|C|2785
3CCS|1|0|G|2786
3CCS|1|0|C|2787
3CCS|1|0|A|2788
3CCS|1|0|U|2789
3CCS|1|0|C|2790
3CCS|1|0|U|2791
3CCS|1|0|A|2792
3CCS|1|0|A|2793
3CCS|1|0|G|2794

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain E

50S ribosomal protein L6P

Chain J

50S ribosomal protein L13P