HL_3CCU_068

3D structure

PDB id

3CCU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Anisomycin resistant 50S Ribosomal Subunit: 23S rRNA mutation G2482C

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CUGAACGCAUCUAAG

Length

15 nucleotides

Bulged bases

3CCU|1|0|G|2786, 3CCU|1|0|C|2790

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3CCU_068 not in the Motif Atlas

Homologous match to HL_4V9F_068

Geometric discrepancy: 0.0355

The information below is about HL_4V9F_068

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_53269.2

Basepair signature

cWW-tWH-cWH-tSH-tHW-tHW-tSW

Number of instances in this motif group

10

Unit IDs

3CCU|1|0|C|2780
3CCU|1|0|U|2781
3CCU|1|0|G|2782
3CCU|1|0|A|2783
3CCU|1|0|A|2784
3CCU|1|0|C|2785
3CCU|1|0|G|2786
3CCU|1|0|C|2787
3CCU|1|0|A|2788
3CCU|1|0|U|2789
3CCU|1|0|C|2790
3CCU|1|0|U|2791
3CCU|1|0|A|2792
3CCU|1|0|A|2793
3CCU|1|0|G|2794

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain E

50S ribosomal protein L6P

Chain J

50S ribosomal protein L13P