HL_3CME_012
3D structure
- PDB id
- 3CME (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The Structure of CA and CCA-PHE-CAP-BIO Bound to the Large Ribosomal Subunit of Haloarcula Marismortui
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.95 Å
Loop
- Sequence
- GUGACAACC
- Length
- 9 nucleotides
- Bulged bases
- 3CME|1|0|G|336, 3CME|1|0|A|337, 3CME|1|0|C|338
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3CME_012 not in the Motif Atlas
- Homologous match to HL_4V9F_012
- Geometric discrepancy: 0.0828
- The information below is about HL_4V9F_012
- Detailed Annotation
- T-loop with unstacked turn
- Broad Annotation
- T-loop
- Motif group
- HL_27670.3
- Basepair signature
- cWW-tWH-F-F
- Number of instances in this motif group
- 15
Unit IDs
3CME|1|0|G|334
3CME|1|0|U|335
3CME|1|0|G|336
3CME|1|0|A|337
3CME|1|0|C|338
3CME|1|0|A|339
3CME|1|0|A|340
3CME|1|0|C|341
3CME|1|0|C|342
Current chains
- Chain 0
- 50S RIBOSOMAL RNA
Nearby chains
- Chain C
- 50S ribosomal protein L4P
- Chain T
- 50S ribosomal protein L24P
- Chain Y
- 50S ribosomal protein L32e
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