HL_3CPW_024

3D structure

PDB id

3CPW (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of the antibiotic LINEZOLID bound to the large ribosomal subunit of HALOARCULA MARISMORTUI

Experimental method

X-RAY DIFFRACTION

Resolution

2.7 Å

Loop

Sequence

UCCUACAAUA

Length

10 nucleotides

Bulged bases

3CPW|1|0|U|840, 3CPW|1|0|A|844, 3CPW|1|0|U|845

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3CPW_024 not in the Motif Atlas

Homologous match to HL_4V9F_024

Geometric discrepancy: 0.0395

The information below is about HL_4V9F_024

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50204.1

Basepair signature

cWW-cWS-tSW-F-F

Number of instances in this motif group

11

Unit IDs

3CPW|1|0|U|837
3CPW|1|0|C|838
3CPW|1|0|C|839
3CPW|1|0|U|840
3CPW|1|0|A|841
3CPW|1|0|C|842
3CPW|1|0|A|843
3CPW|1|0|A|844
3CPW|1|0|U|845
3CPW|1|0|A|846

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain B

50S ribosomal protein L3P

Chain Q

50S ribosomal protein L22P

Chain Z

50S ribosomal protein L37e