HL_3CUN_006

3D structure

PDB id

3CUN (explore in PDB, NAKB, or RNA 3D Hub)

Description

Aminoacyl-tRNA synthetase ribozyme

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

GUUCGAAUC

Length

9 nucleotides

Bulged bases

3CUN|1|D|A|175

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3CUN_006 not in the Motif Atlas

Geometric match to HL_3CUL_003

Geometric discrepancy: 0.122

The information below is about HL_3CUL_003

Detailed Annotation

T-loop related

Broad Annotation

T-loop related

Motif group

HL_87268.1

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

16

Unit IDs

3CUN|1|D|G|169
3CUN|1|D|U|170
3CUN|1|D|U|171
3CUN|1|D|C|172
3CUN|1|D|G|173
3CUN|1|D|A|174
3CUN|1|D|A|175
3CUN|1|D|U|176
3CUN|1|D|C|177

Current chains

Chain D

RNA (92-MER)

Nearby chains