HL_3CXC_030

3D structure

PDB id

3CXC (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of an enhanced oxazolidinone inhibitor bound to the 50S ribosomal subunit of H. marismortui

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CUUAGAAGCAG

Length

11 nucleotides

Bulged bases

3CXC|1|0|A|1174

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3CXC_030 not in the Motif Atlas

Homologous match to HL_4V9F_030

Geometric discrepancy: 0.2079

The information below is about HL_4V9F_030

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_92304.1

Basepair signature

cWW-cSW-R-R-tSH-R-R

Number of instances in this motif group

5

Unit IDs

3CXC|1|0|C|1168
3CXC|1|0|U|1169
3CXC|1|0|U|1170
3CXC|1|0|A|1171
3CXC|1|0|G|1172
3CXC|1|0|A|1173
3CXC|1|0|A|1174
3CXC|1|0|G|1175
3CXC|1|0|C|1176
3CXC|1|0|A|1177
3CXC|1|0|G|1178

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains