HL_3CXC_055

3D structure

PDB id

3CXC (explore in PDB, NAKB, or RNA 3D Hub)

Description

The structure of an enhanced oxazolidinone inhibitor bound to the 50S ribosomal subunit of H. marismortui

Experimental method

X-RAY DIFFRACTION

Resolution

3 Å

Loop

Sequence

CUGGGGCGG

Length

9 nucleotides

Bulged bases

3CXC|1|0|G|2283

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3CXC_055 not in the Motif Atlas

Homologous match to HL_4V9F_055

Geometric discrepancy: 0.0785

The information below is about HL_4V9F_055

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_11974.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

17

Unit IDs

3CXC|1|0|C|2281
3CXC|1|0|U|2282
3CXC|1|0|G|2283
3CXC|1|0|G|2284
3CXC|1|0|G|2285
3CXC|1|0|G|2286
3CXC|1|0|C|2287
3CXC|1|0|G|2288
3CXC|1|0|G|2289

Current chains

Chain 0

23S RIBOSOMAL RNA

Nearby chains

Chain 4

5'-R(*CP*CP*A)-3'

Chain H

RIBOSOMAL PROTEIN L10E