HL_3DEG_008

3D structure

PDB id

3DEG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of elongating Escherichia coli 70S ribosome and EF4(LepA)-GMPPNP

Experimental method

ELECTRON MICROSCOPY

Resolution

10.9 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

3DEG|1|F|A|344

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3DEG_008 not in the Motif Atlas

Geometric match to HL_5Y85_004

Geometric discrepancy: 0.1111

The information below is about HL_5Y85_004

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

3DEG|1|F|C|342
3DEG|1|F|U|343
3DEG|1|F|A|344
3DEG|1|F|C|345
3DEG|1|F|G|346
3DEG|1|F|G|347

Current chains

Chain F

30S RNA helix 14

Nearby chains

Chain E

30S RNA helix 8