HL_3DEG_013

3D structure

PDB id

3DEG (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of elongating Escherichia coli 70S ribosome and EF4(LepA)-GMPPNP

Experimental method

ELECTRON MICROSCOPY

Resolution

10.9 Å

Loop

Sequence

CUGUUCG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3DEG_013 not in the Motif Atlas

Geometric match to HL_5TBW_063

Geometric discrepancy: 0.1595

The information below is about HL_5TBW_063

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_36430.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

15

Unit IDs

3DEG|1|K|C|2551
3DEG|1|K|U|2552
3DEG|1|K|G|2553
3DEG|1|K|U|2554
3DEG|1|K|U|2555
3DEG|1|K|C|2556
3DEG|1|K|G|2557

Current chains

Chain K

50S RNA helix 92

Nearby chains

Chain A

Transfer RNA; tRNA

Chain J

50S RNA helix 71