HL_3DIR_003
3D structure
- PDB id
- 3DIR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystallization of the Thermotoga maritima lysine riboswitch bound to N6-1-iminoethyl-L-Lysine
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- GGAAUAC
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_26938.1
- Basepair signature
- cWW-tSH-R-R-R
- Number of instances in this motif group
- 14
Unit IDs
3DIR|1|A|G|124
3DIR|1|A|G|125
3DIR|1|A|A|126
3DIR|1|A|A|127
3DIR|1|A|U|128
3DIR|1|A|A|129
3DIR|1|A|C|130
Current chains
- Chain A
- RNA (174-MER)
Nearby chains
No other chains within 10ÅColoring options: