HL_3EPH_004
3D structure
- PDB id
- 3EPH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystallographic snapshots of eukaryotic dimethylallyltransferase acting on tRNA: Insight into tRNA recognition and reaction mechanism
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.95 Å
Loop
- Sequence
- CAGUGGUAG
- Length
- 9 nucleotides
- Bulged bases
- 3EPH|1|F|U|16, 3EPH|1|F|G|18, 3EPH|1|F|G|19, 3EPH|1|F|U|20
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_22719.1
- Basepair signature
- Not available
- Number of instances in this motif group
- 1
Unit IDs
3EPH|1|F|C|13
3EPH|1|F|A|14
3EPH|1|F|G|15
3EPH|1|F|U|16
3EPH|1|F|G|18
3EPH|1|F|G|19
3EPH|1|F|U|20
3EPH|1|F|A|21
3EPH|1|F|G|22
Current chains
- Chain F
- tRNA
Nearby chains
- Chain B
- tRNA isopentenyltransferase
Coloring options: