3EPH Hairpin, Internal, and multi-helix Junction Loop Motifs
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| HL_3EPH_001 | 1/E/13:22 | tRNA D-loop HL_45175.1 | ||
| HL_3EPH_002 | 1/E/31:39 | No text annotation HL_37569.2 | ||
| HL_3EPH_003 | 1/E/53:61 | T-loop with 2 stacked bulged bases HL_33597.2 | ||
| HL_3EPH_004 | 1/F/13:22 | tRNA D-loop | geometric HL_4V90_032 NA | |
| HL_3EPH_005 | 1/F/31:39 | No text annotation | geometric HL_2ZZM_002 HL_33487.1 | |
| HL_3EPH_006 | 1/F/53:61 | T-loop with 2 stacked bulged bases | geometric HL_1N78_003 HL_33597.2 |
Problematic loops
No problematic loops
Valid loops
No loops found
Problematic loops
| # | loop id | Problem | Sequence |
|---|---|---|---|
| IL_3EPH_001 | Isolated cWH basepair |
Valid loops
| 3D | Loop id | Location | Annotation; motif group | Mapped info |
|---|---|---|---|---|
| J4_3EPH_001 | 1/E/7:10, 1/E/25:27, 1/E/43:49, 1/E/65:66 | tRNA junction J4_95067.1 | ||
| J4_3EPH_002 | 1/F/5:10, 1/F/25:27, 1/F/43:49, 1/F/65:68 | No text annotation |
Problematic loops
No problematic loops
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