HL_3G4S_024

3D structure

PDB id

3G4S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Co-crystal structure of Tiamulin bound to the large ribosomal subunit

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

UCCUACAAUA

Length

10 nucleotides

Bulged bases

3G4S|1|0|U|840, 3G4S|1|0|A|844, 3G4S|1|0|U|845

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3G4S_024 not in the Motif Atlas

Homologous match to HL_4V9F_024

Geometric discrepancy: 0.0706

The information below is about HL_4V9F_024

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_88205.2

Basepair signature

cWW-cWS-tSW-F-F

Number of instances in this motif group

7

Unit IDs

3G4S|1|0|U|837
3G4S|1|0|C|838
3G4S|1|0|C|839
3G4S|1|0|U|840
3G4S|1|0|A|841
3G4S|1|0|C|842
3G4S|1|0|A|843
3G4S|1|0|A|844
3G4S|1|0|U|845
3G4S|1|0|A|846

Current chains

Chain 0

23S ribosomal RNA

Nearby chains

Chain 1

50S ribosomal protein L37e

Chain B

50S ribosomal protein L3P

Chain R

50S ribosomal protein L22P