HL_3G4S_045

3D structure

PDB id

3G4S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Co-crystal structure of Tiamulin bound to the large ribosomal subunit

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CCGGAACGG

Length

9 nucleotides

Bulged bases

3G4S|1|0|C|1798

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3G4S_045 not in the Motif Atlas

Geometric match to HL_3RG5_006

Geometric discrepancy: 0.3211

The information below is about HL_3RG5_006

Detailed Annotation

tRNA anticodon loop

Broad Annotation

tRNA anticodon loop

Motif group

HL_87268.1

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

16

Unit IDs

3G4S|1|0|C|1792
3G4S|1|0|C|1793
3G4S|1|0|G|1794
3G4S|1|0|G|1795
3G4S|1|0|A|1796
3G4S|1|0|A|1797
3G4S|1|0|C|1798
3G4S|1|0|G|1799
3G4S|1|0|G|1800

Current chains

Chain 0

23S ribosomal RNA

Nearby chains

Chain P

50S ribosomal protein L19e