HL_3G4S_068

3D structure

PDB id

3G4S (explore in PDB, NAKB, or RNA 3D Hub)

Description

Co-crystal structure of Tiamulin bound to the large ribosomal subunit

Experimental method

X-RAY DIFFRACTION

Resolution

3.2 Å

Loop

Sequence

CUGAACGCAUCUAAG

Length

15 nucleotides

Bulged bases

3G4S|1|0|G|2786

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3G4S_068 not in the Motif Atlas

Homologous match to HL_4V9F_068

Geometric discrepancy: 0.1015

The information below is about HL_4V9F_068

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_53269.1

Basepair signature

cWW-tWH-tSH-cWH-tSH-tHW-tHW-tSW

Number of instances in this motif group

11

Unit IDs

3G4S|1|0|C|2780
3G4S|1|0|U|2781
3G4S|1|0|G|2782
3G4S|1|0|A|2783
3G4S|1|0|A|2784
3G4S|1|0|C|2785
3G4S|1|0|G|2786
3G4S|1|0|C|2787
3G4S|1|0|A|2788
3G4S|1|0|U|2789
3G4S|1|0|C|2790
3G4S|1|0|U|2791
3G4S|1|0|A|2792
3G4S|1|0|A|2793
3G4S|1|0|G|2794

Current chains

Chain 0

23S ribosomal RNA

Nearby chains

Chain E

50S ribosomal protein L6P

Chain J

50S ribosomal protein L13P