HL_3G9C_004

3D structure

PDB id

3G9C (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the product Bacillus anthracis glmS ribozyme

Experimental method

X-RAY DIFFRACTION

Resolution

2.9 Å

Loop

Sequence

GGUGAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3G9C_004 not in the Motif Atlas

Geometric match to HL_6JQ5_002

Geometric discrepancy: 0.0641

The information below is about HL_6JQ5_002

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.7

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

349

Unit IDs

3G9C|1|P|G|108
3G9C|1|P|G|109
3G9C|1|P|U|110
3G9C|1|P|G|111
3G9C|1|P|A|112
3G9C|1|P|C|113

Current chains

Chain P

GLMS RIBOZYME

Nearby chains

Chain A

U1 small nuclear ribonucleoprotein A

Chain E

RNA (5'-R(*GP*CP*GP*CP*CP*AP*GP*AP*AP*CP*U)-3')

Chain Q

glmS glucosamine-6-phosphate activated ribozyme; glmS ribozyme