HL_3HL2_002

3D structure

PDB id

3HL2 (explore in PDB, NAKB, or RNA 3D Hub)

Description

The crystal structure of the human SepSecS-tRNASec complex

Experimental method

X-RAY DIFFRACTION

Resolution

2.81 Å

Loop

Sequence

CUAGCG

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3HL2_002 not in the Motif Atlas

Homologous match to HL_3RG5_007

Geometric discrepancy: 0.2276

The information below is about HL_3RG5_007

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

397

Unit IDs

3HL2|1|E|C|46||A|E
3HL2|1|E|U|46||A|F
3HL2|1|E|A|46||A|G
3HL2|1|E|G|46||A|H
3HL2|1|E|C|46||A|I
3HL2|1|E|G|46||A|J

Current chains

Chain E

tRNASec

Nearby chains

Chain A

O-phosphoseryl-tRNA(Sec) selenium transferase