HL_3HL2_003
3D structure
- PDB id
- 3HL2 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The crystal structure of the human SepSecS-tRNASec complex
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.81 Å
Loop
- Sequence
- GUUCAAUUC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3HL2_003 not in the Motif Atlas
- Homologous match to HL_3RG5_008
- Geometric discrepancy: 0.1559
- The information below is about HL_3RG5_008
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_33597.3
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 135
Unit IDs
3HL2|1|E|G|53||A
3HL2|1|E|U|54||A
3HL2|1|E|U|55||A
3HL2|1|E|C|56||A
3HL2|1|E|A|57||A
3HL2|1|E|A|58||A
3HL2|1|E|U|59||A
3HL2|1|E|U|60||A
3HL2|1|E|C|61||A
Current chains
- Chain E
- tRNASec
Nearby chains
- Chain A
- O-phosphoseryl-tRNA(Sec) selenium transferase
- Chain C
- O-phosphoseryl-tRNA(Sec) selenium transferase
Coloring options: