3D structure

PDB id
3IVK (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of the Catalytic Core of an RNA Polymerase Ribozyme Complexed with an Antigen Binding Antibody Fragment
Experimental method
X-RAY DIFFRACTION
Resolution
3.1 Å

Loop

Sequence
GUGGCAGC
Length
8 nucleotides
Bulged bases
3IVK|1|M|U|76
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_12078.5
Basepair signature
cWW-F-F-F-F-F
Number of instances in this motif group
29

Unit IDs

3IVK|1|M|G|75
3IVK|1|M|U|76
3IVK|1|M|G|77
3IVK|1|M|G|78
3IVK|1|M|C|79
3IVK|1|M|A|80
3IVK|1|M|G|81
3IVK|1|M|C|82

Current chains

Chain M
class I ligase product

Nearby chains

No other chains within 10Å

Coloring options:

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