HL_3J0D_001
3D structure
- PDB id
- 3J0D (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Models for the T. thermophilus ribosome recycling factor bound to the E. coli post-termination complex
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 11.1 Å
Loop
- Sequence
- CUUAGAAGCAG
- Length
- 11 nucleotides
- Bulged bases
- 3J0D|1|A|A|1070
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_3J0D_001 not in the Motif Atlas
- Homologous match to HL_6PRV_001
- Geometric discrepancy: 0.0948
- The information below is about HL_6PRV_001
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_20174.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
3J0D|1|A|C|1064
3J0D|1|A|U|1065
3J0D|1|A|U|1066
3J0D|1|A|A|1067
3J0D|1|A|G|1068
3J0D|1|A|A|1069
3J0D|1|A|A|1070
3J0D|1|A|G|1071
3J0D|1|A|C|1072
3J0D|1|A|A|1073
3J0D|1|A|G|1074
Current chains
- Chain A
- ribosomal 23S RNA
Nearby chains
- Chain G
- 50S ribosomal protein L11
- Chain J
- Ribosome-recycling factor
Coloring options: