HL_3J29_011

3D structure

PDB id

3J29 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Dissecting the in vivo assembly of the 30S ribosomal subunit reveals the role of RimM

Experimental method

ELECTRON MICROSCOPY

Resolution

14 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

3J29|1|N|U|421

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_3J29_011 not in the Motif Atlas

Homologous match to HL_4LFB_011

Geometric discrepancy: 0.2881

The information below is about HL_4LFB_011

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

3J29|1|N|C|419
3J29|1|N|U|420
3J29|1|N|U|421
3J29|1|N|C|422
3J29|1|N|G|423
3J29|1|N|G|424

Current chains

Chain N

16S rRNA

Nearby chains